Publications
. DSGeo: software tools for cross-platform analysis of gene expression data in GEO. J Biomed Inform. 2010;43(5):709-15.
. Anomaly and Signature Filtering Improve Classifier Performance For Detection Of Suspicious Access To EHRs. AMIA Annu Symp Proc. 2011;2011:723-31.
. AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm. BMC Bioinformatics. 2011;12:75.
. Calibrating predictive model estimates to support personalized medicine. J Am Med Inform Assoc. 2011.
. iDASH: integrating data for analysis, anonymization, and sharing. J Am Med Inform Assoc. 2011.
. Microarray profiling reveals the integrated stress response is activated by halofuginone in mammary epithelial cells. BMC Res Notes. 2011;4:381.
. Smooth isotonic regression: a new method to calibrate predictive models. AMIA Joint Summit on Translational Science. 2011;2011:16-20.
. Trends in biomedical informatics: most cited topics from recent years. J Am Med Inform Assoc. 2011;18 Suppl 1:i166-70.
. Using statistical and machine learning to help institutions detect suspicious access to electronic health records. J Am Med Inform Assoc. 2011;18(4):498-505.
. Doubly Optimized Calibrated Support Vector Machine (DOC-SVM): An Algorithm for Joint Optimization of Discrimination and Calibration. PLoS One. 2012;7(11):e48823.
. Grid Binary LOgistic REgression (GLORE): building shared models without sharing data. J Am Med Inform Assoc. 2012.
. I-spline Smoothing for Calibrating Predictive Models. AMIA Summits Transl Sci Proc. 2012;2012:39-46.
. A patient-driven adaptive prediction technique to improve personalized risk estimation for clinical decision support. J Am Med Inform Assoc. 2012;19(e1):e137-e144.
. Selecting cases for whom additional tests can improve prognostication. AMIA Annu Symp Proc. 2012;2012:1260-8.
. Comparison of four prediction models to discriminate benign from malignant vertebral compression fractures according to MRI feature analysis. AJR Am J Roentgenol. 2013;200(3):493-502.
. Differential expression of miR-145 in children with Kawasaki disease. PLoS One. 2013;8(3):e58159.

